Although there is no difference for what concerns the main physical-chemical parameters (including compactness, Brix grades and acidity), Portuguese researchers from the Universidade Nova de Lisboa found out that they develop a different response to biotic stress, in particular to fungal disease.
Different polyphenols like catechin, quercetin, quinic acid and caffeoylquinic acid associated to induced resistance mechanisms against fungal pathogens were identified.
Researched explained that "results suggest that the accumulation of phenolic compounds could be one of the factors responsible for the increased resistance of red Morettini pears."
Source: Claudia V. Sánchez, Carmo Serrano, M. Conceição Oliveira, Paula Vasilenko, Mário Santos, Rui M. Sousa, 'Differential susceptibility of Morettini pears to blue mold caused by Penicillium expansum', Emirates Journal of Food and Agriculture, 2016, Vol. 28(6): 374-380. doi: 10.9755/ejfa.2016-04-337